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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954560.1_cds_XP_016493388.1_83504
CDS Infomation

[gene=LOC107812741] [db_xref=GeneID:107812741] [protein=protein PHR1-LIKE 1-like] [protein_id=XP_016493388.1] [location=complement(join(76217..76558,77725..77794,78466..78523,79695..79734,80800..80876,80956..81166,81290..81889))] [gbkey=CDS]
Sequence

ATGGAGGCGCGTCCTACTTTATCCGTCCAGAGGGCGGGTGCACATCAACTCAGTAATTTT
GGAGCATCAGGACCTCATTCTTCATTACCTATGCTTCCAGCAAACTTGGAGGACAAATAT
CCTATGTTGCCGAGGGCTGTCCTTTCTTCATTGCCTTCAAACAGTGGGGTGGTCGGTCAT
TTGTTGTCCTTATCTTCAGGATTCTCCACCAATCTTCACTTTTCATCTGTTCTGCCTCAT
GAAGAGCATTCTGCACCTATACCTTTCATTTCTCAGTCAACAAATAATGAAGCATTAATC
CCATTAGCTAATTCCGGAGTTCTTCAATCTGCAGCATCAAGCCAGTATCTTAATGAAAAT
AATGAACCCTGGTGTACAGCGCCATTGCCTGATTACATCGATTACTCGATAAATACCCCC
GTCCACAACACTCAACTAGATTGTAGCAATACAGGTGATTGTCTCATCCCATCTGAGGAT
CTTAGTAAACAAAGTGATTGGCCGGAATGGGCTGACCTTGTAATGAATGATGATGATGCT
CTGACTTCTAACTGGAACGACATCATGGTAGATACTAGCATTGCTGATGCCGAGCCAAAG
ATGCAATATCAGGAACAAAAACAACCTTCAAATTTCCCAGTAGACCAATGCCAACCATTG
CAACAAATTCCTACTGCATCTGTAGAAACATCTGCCATTGTTCCTGCATCATCCACTGCA
AGTGGTGCTTCATCGAAGCAACGAATGCGTTGGACACCAGAACTTCATGAAGCATTTGTG
GAAGCAGTCAACAAACTTGGTGGAAGTGAAAGAGCTACTCCCAAGGGTGTGCTGAAGTTA
ATGAAAGTTGAAGGTTTGACCATCTATCACATAAAAAGCCATTTGCAGAAATATCGAACA
GCTAGATATAAACCAGAAGCATCAGAGGGGTCCTCTGAGAAGAAAGAGTCATCCATTGGT
GATTTGTCAGCTCTGGACTTGAAAACGGGTATTGAGATCACTGAAGCATTGCGGTTACAG
ATGGAAGTTCAGAAACAGCTGCATGAACAACTTGAGATTCAAAGAAATCTGCAGCTGCGT
ATAGAAGAACAAGGGCGATATCTCCAGGAGATGTTTGAAAAGCAATGCAAGTCGATTCCG
AGTATTGACTTGGTAAAGGCCTCATCATCCATAGCTGAGGATGCCTCTGCACAGTCGACA
GATGCAGTTCAACGCTCCTCAAACAAAAATGATCCAGGAGTGCCACCAAGCAATCCTCAA
GAAGCAGGAGATTATATAGCTCAAAAGGTGGGGGAGAAGCAGAAAGAGCAAGAAAGAGAA
GATCTTGAAAATCCTGAGACAAATATTTCAAGCTCATCAAATACACCACCAACGAAGCGT
GCTAAACTGGATGAATAA

Peptide Sequence

PEP ID

XP_016493388.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like [Nicotiana tabacum]
Sequence

MEARPTLSVQRAGAHQLSNFGASGPHSSLPMLPANLEDKYPMLPRAVLSSLPSNSGVVGH
LLSLSSGFSTNLHFSSVLPHEEHSAPIPFISQSTNNEALIPLANSGVLQSAASSQYLNEN
NEPWCTAPLPDYIDYSINTPVHNTQLDCSNTGDCLIPSEDLSKQSDWPEWADLVMNDDDA
LTSNWNDIMVDTSIADAEPKMQYQEQKQPSNFPVDQCQPLQQIPTASVETSAIVPASSTA
SGASSKQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHIKSHLQKYRT
ARYKPEASEGSSEKKESSIGDLSALDLKTGIEITEALRLQMEVQKQLHEQLEIQRNLQLR
IEEQGRYLQEMFEKQCKSIPSIDLVKASSSIAEDASAQSTDAVQRSSNKNDPGVPPSNPQ
EAGDYIAQKVGEKQKEQEREDLENPETNISSSSNTPPTKRAKLDE

Transcript Sequence

Gene sequence data has not been registered.